Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c1 | SAMN05421512_101414 | Not Available | Negative | 447701 - 448585 | 32327.2 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN05421512_101415 | Not Available | Negative | 448615 - 449877 | 47075.3 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SAMN05421512_101416 | Not Available | Negative | 449905 - 450465 | 19867.5 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN05421512_101417 | Not Available | Negative | 450821 - 452662 | 67958.1 |
| hypothetical protein | SAMN05421512_101418 | Not Available | Negative | 452646 - 453104 | 15933.4 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN05421512_101419 | Not Available | Negative | 453742 - 455610 | 67332.1 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN05421512_101420 | Not Available | Positive | 455766 - 456260 | 17409.1 |
| protein of unknown function | SAMN05421512_101421 | Not Available | Positive | 456351 - 457358 | 36183.4 |
| coproporphyrinogen oxidase | SAMN05421512_101422 | Not Available | Positive | 457456 - 458394 | 34951.0 |
| predicted atpase | SAMN05421512_101423 | Not Available | Positive | 458410 - 459531 | 40039.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
