Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:h+ antiporter | SAMN05421512_101374 | Not Available | Positive | 414107 - 415096 | 34095.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_101375 | Not Available | Positive | 415164 - 415952 | 28185.0 |
| excinuclease abc subunit c | SAMN05421512_101376 | Not Available | Positive | 415949 - 418012 | 76351.8 |
| hypothetical protein | SAMN05421512_101377 | Not Available | Positive | 418110 - 418406 | 10724.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421512_101378 | Not Available | Negative | 418414 - 419127 | 27239.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN05421512_101379 | Not Available | Positive | 419336 - 419908 | 20697.9 |
| molybdopterin synthase subunit moad | SAMN05421512_101380 | Not Available | Positive | 419932 - 420183 | 9217.75 |
| molybdopterin synthase subunit moae | SAMN05421512_101381 | Not Available | Positive | 420191 - 420685 | 18155.6 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05421512_101382 | Not Available | Positive | 420789 - 422024 | 43467.6 |
| branched-chain amino acid aminotransferase | SAMN05421512_101383 | Not Available | Negative | 422108 - 423010 | 33467.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
