Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein, cspa family | SAMN05421512_101364 | Not Available | Positive | 406237 - 406995 | 26163.6 |
| hypothetical protein | SAMN05421512_101365 | Not Available | Positive | 407208 - 407729 | 18321.7 |
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN05421512_101366 | Not Available | Positive | 407726 - 408577 | 31716.3 |
| hypothetical protein | SAMN05421512_101367 | Not Available | Positive | 408670 - 409116 | 16344.5 |
| ribonuclease t2 | SAMN05421512_101368 | Not Available | Positive | 409188 - 409835 | 24254.2 |
| invasion associated locus b (ialb) protein | SAMN05421512_101369 | Not Available | Positive | 409813 - 410877 | 37987.2 |
| hypothetical protein | SAMN05421512_101370 | Not Available | Negative | 410889 - 411143 | 9340.58 |
| glutathione s-transferase | SAMN05421512_101371 | Not Available | Positive | 411451 - 412065 | 21938.6 |
| abc-type phosphate/phosphonate transport system, substrate-binding protein | SAMN05421512_101372 | Not Available | Negative | 412075 - 412902 | 29482.3 |
| outer membrane immunogenic protein | SAMN05421512_101373 | Not Available | Negative | 413046 - 413717 | 23907.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
