Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN05421512_113161 | Not Available | Negative | 4511269 - 4511556 | 10196.6 |
| Ribonuclease iii | SAMN05421512_113162 | Not Available | Negative | 4511573 - 4512649 | 38147.8 |
| Tail protein | SAMN05421512_113163 | Not Available | Negative | 4512660 - 4516625 | 141849.0 |
| Gta-like protein | SAMN05421512_113164 | Not Available | Negative | 4516635 - 4517069 | 16075.5 |
| Minor tail protein | SAMN05421512_113165 | Not Available | Negative | 4517066 - 4517950 | 31604.9 |
| Tail protein | SAMN05421512_113166 | Not Available | Negative | 4517947 - 4518573 | 22606.4 |
| Putative tail tape measure protein | SAMN05421512_113167 | Not Available | Negative | 4518573 - 4520990 | 81741.4 |
| hypothetical protein | SAMN05421512_113168 | Not Available | Negative | 4520971 - 4521141 | 5800.26 |
| hypothetical protein | SAMN05421512_113169 | Not Available | Negative | 4521210 - 4521647 | 15413.2 |
| Major tail structural protein | SAMN05421512_113170 | Not Available | Negative | 4521647 - 4522588 | 33355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
