Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b561 | SAMN05421512_101324 | Not Available | Positive | 359957 - 360481 | 19247.1 |
| sarcosine oxidase | SAMN05421512_101325 | Not Available | Negative | 360521 - 361618 | 38898.2 |
| conserved hypothetical protein, steroid delta-isomerase-related | SAMN05421512_101326 | Not Available | Negative | 361668 - 362078 | 15025.7 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421512_101327 | Not Available | Negative | 362197 - 362628 | 15777.6 |
| transcriptional regulator, tetr family | SAMN05421512_101328 | Not Available | Positive | 362805 - 363431 | 21882.0 |
| hypothetical protein | SAMN05421512_101329 | Not Available | Negative | 363449 - 364147 | 25836.3 |
| putative oxidoreductase | SAMN05421512_101330 | Not Available | Negative | 364295 - 364684 | 13456.8 |
| protein of unknown function | SAMN05421512_101331 | Not Available | Negative | 364876 - 366330 | 49682.6 |
| rna polymerase, sigma 70 subunit, rpod | SAMN05421512_101332 | Not Available | Negative | 366848 - 368896 | 76858.0 |
| dna primase | SAMN05421512_101333 | Not Available | Negative | 369458 - 371569 | 76897.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
