Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer with pas/pac sensor | SAMN05421512_101314 | Not Available | Positive | 350018 - 351979 | 72066.2 |
| Trna-met | Not Available | Not Available | Positive | 352084 - 352159 | Not Available |
| predicted purr-regulated permease perm | SAMN05421512_101316 | Not Available | Positive | 352341 - 353423 | 38669.9 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05421512_101317 | Not Available | Positive | 353756 - 354739 | 35901.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_101318 | Not Available | Positive | 354741 - 355286 | 20012.0 |
| c4-dicarboxylate transporter, dctm subunit | SAMN05421512_101319 | Not Available | Positive | 355283 - 356530 | 43393.1 |
| hypothetical protein | SAMN05421512_101320 | Not Available | Positive | 356776 - 357516 | 26042.3 |
| hypothetical protein | SAMN05421512_101321 | Not Available | Negative | 357623 - 358222 | 22211.4 |
| s-adenosylmethionine decarboxylase | SAMN05421512_101322 | Not Available | Positive | 358345 - 358884 | 19586.7 |
| spermidine synthase | SAMN05421512_101323 | Not Available | Positive | 358881 - 359753 | 32254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
