Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l10p | SAMN05421512_1218 | Not Available | Negative | 5001976 - 5002494 | 17867.6 |
| lsu ribosomal protein l1p | SAMN05421512_1219 | Not Available | Negative | 5002837 - 5003532 | 24129.4 |
| lsu ribosomal protein l11p | SAMN05421512_12110 | Not Available | Negative | 5003537 - 5003968 | 15297.6 |
| transcription antitermination protein nusg | SAMN05421512_12111 | Not Available | Negative | 5004210 - 5004740 | 20038.1 |
| protein translocase subunit sece/sec61 gamma | SAMN05421512_12112 | Not Available | Negative | 5004774 - 5004971 | 7295.14 |
| Trna-trp | Not Available | Not Available | Positive | 5005076 - 5005151 | Not Available |
| transposase is116/is110/is902 family protein | SAMN05421512_1221 | Not Available | Positive | 5005416 - 5005670 | 9240.61 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN05421512_1222 | Not Available | Negative | 5006000 - 5007571 | 56749.2 |
| multidrug resistance protein, mate family | SAMN05421512_1223 | Not Available | Positive | 5008176 - 5009579 | 47956.8 |
| two component transcriptional regulator, winged helix family | SAMN05421512_1224 | Not Available | Positive | 5009688 - 5010386 | 26754.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
