Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transport system substrate-binding protein | SAMN05421512_11921 | Not Available | Positive | 4967382 - 4968404 | 36184.3 |
| hypothetical protein | SAMN05421512_12029 | Not Available | Negative | 4988410 - 4988712 | 11291.5 |
| hypothetical protein | SAMN05421512_12030 | Not Available | Negative | 4988709 - 4989002 | 10633.6 |
| elongation factor tu | SAMN05421512_1211 | Not Available | Negative | 4989040 - 4989131 | 3331.05 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN05421512_1212 | Not Available | Negative | 4989181 - 4991256 | 75985.1 |
| ssu ribosomal protein s7p | SAMN05421512_1213 | Not Available | Negative | 4991280 - 4991750 | 17933.5 |
| hypothetical protein | SAMN05421512_1214 | Not Available | Negative | 4992474 - 4992773 | 10543.3 |
| dna-directed rna polymerase subunit beta' | SAMN05421512_1215 | Not Available | Negative | 4992889 - 4997088 | 155543.0 |
| dna-directed rna polymerase subunit beta | SAMN05421512_1216 | Not Available | Negative | 4997193 - 5001335 | 153924.0 |
| lsu ribosomal protein l12p | SAMN05421512_1217 | Not Available | Negative | 5001538 - 5001915 | 12984.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
