Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein exbb | SAMN05421512_11911 | Not Available | Negative | 4957278 - 4957985 | 24612.9 |
| hypothetical protein | SAMN05421512_11912 | Not Available | Negative | 4958054 - 4958509 | 15576.5 |
| hemoglobin/transferrin/lactoferrin receptor protein | SAMN05421512_11913 | Not Available | Negative | 4958528 - 4960618 | 75230.7 |
| putative hemin transport protein | SAMN05421512_11914 | Not Available | Positive | 4960985 - 4962046 | 39302.8 |
| iron complex transport system substrate-binding protein | SAMN05421512_11915 | Not Available | Positive | 4962070 - 4962966 | 30590.9 |
| iron complex transport system permease protein | SAMN05421512_11916 | Not Available | Positive | 4962980 - 4964095 | 37557.4 |
| iron complex transport system atp-binding protein | SAMN05421512_11917 | Not Available | Positive | 4964092 - 4964913 | 29021.2 |
| fur family transcriptional regulator, zinc uptake regulator | SAMN05421512_11918 | Not Available | Negative | 4965044 - 4965451 | 14645.6 |
| zinc transport system permease protein | SAMN05421512_11919 | Not Available | Negative | 4965465 - 4966307 | 29377.1 |
| zinc transport system atp-binding protein | SAMN05421512_11920 | Not Available | Negative | 4966300 - 4967193 | 31996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
