Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_101304 | Not Available | Negative | 337471 - 338283 | 28023.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_101305 | Not Available | Negative | 338305 - 339084 | 26930.3 |
| nipsnap protein | SAMN05421512_101306 | Not Available | Negative | 339108 - 339422 | 12270.6 |
| flagellar motor protein motb | SAMN05421512_101307 | Not Available | Negative | 339680 - 340636 | 35299.2 |
| hypothetical protein | SAMN05421512_101308 | Not Available | Negative | 340644 - 341957 | 47632.9 |
| hypothetical protein | SAMN05421512_101309 | Not Available | Negative | 341959 - 342774 | 29730.5 |
| hypothetical protein | SAMN05421512_101310 | Not Available | Negative | 342752 - 344206 | 54741.1 |
| probable extracellular repeat, haf family | SAMN05421512_101311 | Not Available | Negative | 344557 - 346914 | 78802.8 |
| hypothetical protein | SAMN05421512_101312 | Not Available | Positive | 347056 - 349203 | 76812.5 |
| two component transcriptional regulator, luxr family | SAMN05421512_101313 | Not Available | Positive | 349200 - 349898 | 24609.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
