Stappia indica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia indica is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C. This microbe is characterized by its distinct morphological and physiological traits, which align with the broader characteristics typically attributed to the genus Stappia. As a Gram-negative organism, Stappia indica possesses a thin peptidoglycan layer surrounded by an outer membrane, which contributes to its structural integrity and influences its interactions with the environment. Given its optimal growth temperature, Stappia indica may be well-suited to mesophilic environments, potentially indicating a niche within temperate ecosystems where the ambient temperature fluctuates around this range. While specific ecological roles and interactions are not detailed, the thermal preference suggests that Stappia indica could play a role in nutrient cycling or organic matter degradation in habitats that experience moderate temperatures. Furthermore, the rod shape of Stappia indica may confer advantages in motility and surface adherence, which are essential traits for colonization and interaction with various substrates. This morphology may also facilitate the microbe's ability to thrive in diverse environments, potentially contributing to a dynamic ecological role within its habitat. Understanding the physiological and environmental preferences of Stappia indica can provide insights into its potential functional contributions to microbial communities and ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia indica strain USBA 352 genome assembly, contig:

Gene Summary

Adenine Count

825960 bp

Thymine Count

819759 bp

Guanine Count

1662501 bp

Cytosine Count

1703840 bp

Genome Length

5015470 bp

Protein-coding Genes

4471 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein terc, possibly involved in tellurium resistanceSAMN05421512_11820Not AvailableNegative4916251 - 491781656744.1
s-adenosylmethionine-diacylgycerolhomoserine-n- methlytransferaseSAMN05421512_11821Not AvailableNegative4918159 - 491883624421.4
s-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferaseSAMN05421512_11822Not AvailableNegative4918833 - 492009247052.1
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit bSAMN05421512_11823Not AvailableNegative4920301 - 492178553823.2
protein of unknown functionSAMN05421512_11824Not AvailableNegative4922065 - 492307237600.8
hypothetical proteinSAMN05421512_11825Not AvailableNegative4923225 - 49234046775.03
omega-6 fatty acid desaturase (delta-12 desaturase)SAMN05421512_11826Not AvailableNegative4923534 - 492456238990.3
flagellar biosynthesis proteinSAMN05421512_11827Not AvailableNegative4924751 - 49250179583.58
hook-length control protein flikSAMN05421512_11828Not AvailableNegative4925014 - 492629742929.2
hypothetical proteinSAMN05421512_11829Not AvailablePositive4926484 - 49267509485.54

Displaying genes 4551 – 4560 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial peritonitisCausesPMC8271035

Displaying health effects 1 – 1 of 1 in total