Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_11762 | Not Available | Negative | 4895184 - 4896413 | 43605.0 |
| 4-carboxymuconolactone decarboxylase | SAMN05421512_11763 | Not Available | Negative | 4896467 - 4896877 | 15333.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421512_11764 | Not Available | Negative | 4896897 - 4898174 | 44994.3 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05421512_11765 | Not Available | Negative | 4898146 - 4899045 | 30414.6 |
| transposase is116/is110/is902 family protein | SAMN05421512_11766 | Not Available | Negative | 4899346 - 4899684 | 11929.0 |
| hypothetical protein | SAMN05421512_11815 | Not Available | Positive | 4913125 - 4913415 | 10739.7 |
| hypothetical protein | SAMN05421512_11816 | Not Available | Negative | 4913637 - 4913906 | 9601.56 |
| uncharacterized conserved protein, duf2147 family | SAMN05421512_11817 | Not Available | Positive | 4914364 - 4914816 | 15889.3 |
| gst-like protein | SAMN05421512_11818 | Not Available | Negative | 4914847 - 4915560 | 26885.2 |
| acetyltransferase (gnat) family protein | SAMN05421512_11819 | Not Available | Negative | 4915746 - 4916243 | 17438.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
