Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 4846685 - 4846760 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4846824 - 4846900 | Not Available |
| hypothetical protein | SAMN05421512_11743 | Not Available | Positive | 4878118 - 4878402 | 10194.0 |
| transcriptional regulator, tetr family | SAMN05421512_11744 | Not Available | Positive | 4878893 - 4879531 | 23199.4 |
| hypothetical protein | SAMN05421512_11745 | Not Available | Positive | 4879528 - 4880073 | 20027.3 |
| hypothetical protein | SAMN05421512_11746 | Not Available | Positive | 4880060 - 4880374 | 11143.5 |
| hypothetical protein | SAMN05421512_11747 | Not Available | Negative | 4880397 - 4881449 | 38327.7 |
| iron complex transport system atp-binding protein | SAMN05421512_11748 | Not Available | Negative | 4881431 - 4882234 | 29042.2 |
| iron complex transport system permease protein | SAMN05421512_11749 | Not Available | Negative | 4882231 - 4883229 | 33780.7 |
| iron complex transport system substrate-binding protein | SAMN05421512_11750 | Not Available | Negative | 4883226 - 4884131 | 31866.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
