Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxygluconate kinase | SAMN05421512_11635 | Not Available | Positive | 4813341 - 4814270 | 31782.8 |
| l,d-transpeptidase catalytic domain | SAMN05421512_11636 | Not Available | Positive | 4814340 - 4814963 | 22936.7 |
| adenylate cyclase | SAMN05421512_11637 | Not Available | Negative | 4815062 - 4816246 | 42654.9 |
| protein translocase subunit seca | SAMN05421512_11638 | Not Available | Negative | 4816343 - 4819120 | 103634.0 |
| peptidyl-prolyl cis-trans isomerase c | SAMN05421512_11639 | Not Available | Positive | 4819420 - 4820325 | 32444.0 |
| transcriptional regulator, tetr family | SAMN05421512_11640 | Not Available | Negative | 4820339 - 4820989 | 23465.6 |
| hypothetical protein | SAMN05421512_11641 | Not Available | Positive | 4821262 - 4821552 | 10377.0 |
| glutamate n-acetyltransferase | SAMN05421512_11642 | Not Available | Positive | 4821626 - 4822858 | 42679.7 |
| acetyltransferase (gnat) family protein | SAMN05421512_11643 | Not Available | Positive | 4822872 - 4823732 | 31020.1 |
| 8-oxo-dgtp diphosphatase | SAMN05421512_11644 | Not Available | Positive | 4823729 - 4824127 | 14672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
