Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph2:quinone reductase | SAMN05421512_101294 | Not Available | Positive | 327086 - 328069 | 34037.5 |
| acyl-coa thioester hydrolase | SAMN05421512_101295 | Not Available | Positive | 328066 - 328494 | 15884.2 |
| hypothetical protein | SAMN05421512_101296 | Not Available | Positive | 328598 - 329758 | 43089.2 |
| acyl-coa dehydrogenase | SAMN05421512_101297 | Not Available | Positive | 329764 - 330834 | 37761.1 |
| enoyl-coa hydratase | SAMN05421512_101298 | Not Available | Positive | 330850 - 331656 | 29276.2 |
| dna-binding transcriptional regulator, fadr family | SAMN05421512_101299 | Not Available | Negative | 331765 - 333282 | 56482.7 |
| trap transporter, dctm subunit | SAMN05421512_101300 | Not Available | Negative | 333598 - 334905 | 45580.8 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_101301 | Not Available | Negative | 334902 - 335384 | 17338.9 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_101302 | Not Available | Negative | 335424 - 336545 | 40112.8 |
| transcriptional regulator, gntr family | SAMN05421512_101303 | Not Available | Positive | 336716 - 337438 | 26839.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
