Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421512_11625 | Not Available | Positive | 4801749 - 4802171 | 15316.5 |
| serine protease, subtilisin family | SAMN05421512_11626 | Not Available | Negative | 4802295 - 4804355 | 69106.0 |
| hypothetical protein | SAMN05421512_11627 | Not Available | Negative | 4804608 - 4805369 | 27319.7 |
| putative abc transport system permease protein | SAMN05421512_11628 | Not Available | Negative | 4805623 - 4808205 | 90623.0 |
| putative abc transport system atp-binding protein | SAMN05421512_11629 | Not Available | Negative | 4808208 - 4808921 | 24728.9 |
| acyl-coa thioesterase-1 | SAMN05421512_11630 | Not Available | Positive | 4809023 - 4809658 | 22022.7 |
| predicted oxidoreductase | SAMN05421512_11631 | Not Available | Positive | 4809801 - 4810853 | 38961.1 |
| 2'-5' rna ligase | SAMN05421512_11632 | Not Available | Positive | 4811032 - 4811625 | 22204.7 |
| inorganic pyrophosphatase | SAMN05421512_11633 | Not Available | Positive | 4811773 - 4812309 | 20001.1 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05421512_11634 | Not Available | Negative | 4812393 - 4813175 | 27286.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
