Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma-like c-terminal region | SAMN05421512_1165 | Not Available | Positive | 4780701 - 4783733 | 104759.0 |
| inorganic triphosphatase ygif, contains cyth and chad domains | SAMN05421512_1166 | Not Available | Negative | 4783785 - 4785389 | 58450.5 |
| hypothetical protein | SAMN05421512_1167 | Not Available | Positive | 4785591 - 4786139 | 19867.8 |
| l-fuculose-phosphate aldolase | SAMN05421512_1168 | Not Available | Negative | 4786142 - 4786855 | 25715.7 |
| Trna-leu | Not Available | Not Available | Positive | 4786958 - 4787044 | Not Available |
| membrane protein yqaa, snare-associated domain | SAMN05421512_11610 | Not Available | Positive | 4787184 - 4787762 | 20858.1 |
| disulfide bond formation protein dsbb | SAMN05421512_11611 | Not Available | Positive | 4787780 - 4788304 | 17997.2 |
| hypothetical protein | SAMN05421512_11612 | Not Available | Positive | 4788301 - 4788552 | 9356.12 |
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN05421512_11613 | Not Available | Positive | 4788575 - 4789012 | 15860.4 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05421512_11614 | Not Available | Negative | 4789052 - 4790236 | 41724.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
