Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05421512_11591 | Not Available | Positive | 4768961 - 4769899 | 33935.5 |
| flavin reductase | SAMN05421512_11592 | Not Available | Positive | 4770035 - 4770568 | 18567.1 |
| l-aminopeptidase/d-esterase | SAMN05421512_11593 | Not Available | Positive | 4770602 - 4771597 | 33220.5 |
| indolepyruvate ferredoxin oxidoreductase | SAMN05421512_11594 | Not Available | Negative | 4771624 - 4775118 | 125846.0 |
| lrp/asnc family transcriptional regulator | SAMN05421512_11595 | Not Available | Positive | 4775287 - 4775766 | 17970.1 |
| hypothetical protein | SAMN05421512_11596 | Not Available | Positive | 4775763 - 4776440 | 24400.6 |
| hypothetical protein | SAMN05421512_1161 | Not Available | Negative | 4776467 - 4776637 | 5815.85 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421512_1162 | Not Available | Negative | 4777228 - 4779183 | 71849.3 |
| gmp synthase (glutamine-hydrolysing) | SAMN05421512_1163 | Not Available | Negative | 4779235 - 4779990 | 28015.6 |
| uncharacterized conserved protein, tellurite resistance protein b (terb) family | SAMN05421512_1164 | Not Available | Negative | 4780040 - 4780528 | 18084.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
