Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00659 family protein | SAMN05421512_11581 | Not Available | Negative | 4760656 - 4761378 | 24663.9 |
| putative effector of murein hydrolase lrga, upf0299 family | SAMN05421512_11582 | Not Available | Negative | 4761375 - 4761749 | 12512.0 |
| hypothetical protein | SAMN05421512_11583 | Not Available | Positive | 4762026 - 4762217 | 6609.28 |
| l,d-transpeptidase catalytic domain | SAMN05421512_11584 | Not Available | Negative | 4762239 - 4762757 | 18526.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_11585 | Not Available | Negative | 4762946 - 4764049 | 38639.6 |
| hypothetical protein | SAMN05421512_11586 | Not Available | Negative | 4764251 - 4764613 | 13514.7 |
| branched-chain amino acid transport system atp-binding protein | SAMN05421512_11587 | Not Available | Negative | 4764720 - 4765451 | 26870.1 |
| branched-chain amino acid transport system atp-binding protein | SAMN05421512_11588 | Not Available | Negative | 4765448 - 4766293 | 31007.1 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_11589 | Not Available | Negative | 4766290 - 4767615 | 47892.7 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421512_11590 | Not Available | Negative | 4767620 - 4768555 | 33232.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
