Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | SAMN05421512_11561 | Not Available | Positive | 4738147 - 4738857 | 26327.6 |
| phasin protein | SAMN05421512_11562 | Not Available | Positive | 4739018 - 4739416 | 14584.4 |
| acetate kinase | SAMN05421512_11563 | Not Available | Negative | 4739438 - 4740628 | 42572.3 |
| phosphate butyryltransferase | SAMN05421512_11564 | Not Available | Negative | 4740625 - 4742019 | 47908.1 |
| glutathione peroxidase | SAMN05421512_11565 | Not Available | Positive | 4742208 - 4742792 | 20975.7 |
| deoxyribodipyrimidine photo-lyase family protein (cryptochrome) | SAMN05421512_11566 | Not Available | Positive | 4742841 - 4744409 | 58471.7 |
| hypothetical protein | SAMN05421512_11567 | Not Available | Positive | 4744406 - 4744573 | 6888.35 |
| periplasmic sensor diguanylate cyclase/phosphodiesterase | SAMN05421512_11568 | Not Available | Positive | 4744690 - 4746939 | 82284.5 |
| lao/ao transport system kinase | SAMN05421512_11569 | Not Available | Negative | 4746940 - 4747884 | 32346.8 |
| pyruvate phosphate dikinase | SAMN05421512_11570 | Not Available | Negative | 4747889 - 4750561 | 96163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
