Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine phosphoribosyltransferase | SAMN05421512_11551 | Not Available | Positive | 4727488 - 4727997 | 18860.6 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421512_11552 | Not Available | Positive | 4728117 - 4728854 | 27122.8 |
| sugar fermentation stimulation protein a | SAMN05421512_11553 | Not Available | Negative | 4728920 - 4729621 | 25266.5 |
| trk system potassium uptake protein trkh | SAMN05421512_11554 | Not Available | Negative | 4729647 - 4731092 | 51216.7 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN05421512_11555 | Not Available | Positive | 4731525 - 4732052 | 18294.4 |
| cation:h+ antiporter | SAMN05421512_11556 | Not Available | Negative | 4732076 - 4733095 | 35021.9 |
| selenocysteine lyase/cysteine desulfurase | SAMN05421512_11557 | Not Available | Negative | 4733178 - 4734497 | 46838.0 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421512_11558 | Not Available | Negative | 4734623 - 4736167 | 54043.1 |
| uncharacterized membrane protein | SAMN05421512_11559 | Not Available | Negative | 4736160 - 4736579 | 15359.1 |
| methionine aminopeptidase, type i | SAMN05421512_11560 | Not Available | Positive | 4737288 - 4738121 | 30219.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
