Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_11541 | Not Available | Negative | 4718990 - 4719307 | 11334.3 |
| hypothetical protein | SAMN05421512_11542 | Not Available | Positive | 4719547 - 4720272 | 25784.0 |
| protein of unknown function | SAMN05421512_11543 | Not Available | Negative | 4720386 - 4720604 | 8514.99 |
| serine o-acetyltransferase | SAMN05421512_11544 | Not Available | Negative | 4720809 - 4721642 | 29886.9 |
| enoyl-coa hydratase/carnithine racemase | SAMN05421512_11545 | Not Available | Positive | 4721894 - 4722703 | 28371.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421512_11546 | Not Available | Negative | 4723258 - 4724142 | 31846.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421512_11547 | Not Available | Negative | 4724139 - 4724906 | 27634.1 |
| uncharacterized conserved protein, contains zn-finger domain | SAMN05421512_11548 | Not Available | Positive | 4725133 - 4725378 | 9012.53 |
| salicylate hydroxylase | SAMN05421512_11549 | Not Available | Positive | 4725404 - 4726627 | 44440.3 |
| molybdenum cofactor synthesis domain-containing protein | SAMN05421512_11550 | Not Available | Positive | 4726706 - 4727449 | 26734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
