Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421512_101284 | Not Available | Negative | 316899 - 317636 | 26760.5 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_101285 | Not Available | Negative | 317633 - 318661 | 36873.1 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421512_101286 | Not Available | Negative | 318658 - 319542 | 30707.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_101287 | Not Available | Negative | 319637 - 320899 | 45263.6 |
| glycerol dehydrogenase | SAMN05421512_101288 | Not Available | Negative | 321263 - 322369 | 38446.6 |
| chrr cupin-like domain-containing protein | SAMN05421512_101289 | Not Available | Negative | 322366 - 322908 | 20045.8 |
| transketolase | SAMN05421512_101290 | Not Available | Negative | 322972 - 323958 | 35431.0 |
| transketolase | SAMN05421512_101291 | Not Available | Negative | 323951 - 324793 | 30090.8 |
| 4-oxalocrotonate tautomerase | SAMN05421512_101292 | Not Available | Positive | 325099 - 325305 | 7341.95 |
| feruloyl-coa synthase | SAMN05421512_101293 | Not Available | Negative | 325358 - 326926 | 55828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
