Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421512_11521 | Not Available | Negative | 4699820 - 4700428 | 21884.1 |
| nitroreductase | SAMN05421512_11522 | Not Available | Negative | 4700425 - 4701009 | 21514.9 |
| hypothetical protein | SAMN05421512_11523 | Not Available | Positive | 4701234 - 4702283 | 36906.6 |
| putative hemolysin | SAMN05421512_11524 | Not Available | Negative | 4702300 - 4703172 | 33039.4 |
| threonyl-trna synthetase | SAMN05421512_11525 | Not Available | Negative | 4703318 - 4705273 | 73886.0 |
| methyl-accepting chemotaxis sensory transducer | SAMN05421512_11526 | Not Available | Negative | 4705524 - 4707197 | 58637.9 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN05421512_11527 | Not Available | Negative | 4707577 - 4709031 | 54391.5 |
| ribosomal protein s18 acetylase rimi | SAMN05421512_11528 | Not Available | Negative | 4709037 - 4710224 | 43454.8 |
| hypothetical protein | SAMN05421512_11529 | Not Available | Negative | 4710392 - 4710694 | 11138.3 |
| nifu homolog involved in fe-s cluster formation | SAMN05421512_11530 | Not Available | Negative | 4710757 - 4711194 | 15355.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
