Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c556 | SAMN05421512_11511 | Not Available | Positive | 4691839 - 4692282 | 15432.6 |
| cytochrome c, mono- and diheme variants | SAMN05421512_11512 | Not Available | Positive | 4692390 - 4693304 | 32076.7 |
| divalent cation tolerance protein | SAMN05421512_11513 | Not Available | Negative | 4693324 - 4693659 | 12191.3 |
| nad+ kinase | SAMN05421512_11514 | Not Available | Positive | 4693718 - 4694500 | 29023.7 |
| response regulator receiver domain-containing protein | SAMN05421512_11515 | Not Available | Positive | 4694600 - 4695178 | 21550.8 |
| hpt domain-containing protein | SAMN05421512_11516 | Not Available | Positive | 4695264 - 4695791 | 19260.5 |
| uncharacterized conserved protein, duf2336 family | SAMN05421512_11517 | Not Available | Negative | 4695825 - 4696979 | 41478.4 |
| hypothetical protein | SAMN05421512_11518 | Not Available | Negative | 4697152 - 4698228 | 38512.2 |
| acyl dehydratase | SAMN05421512_11519 | Not Available | Positive | 4698417 - 4698869 | 16948.3 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05421512_11520 | Not Available | Positive | 4698872 - 4699753 | 30986.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
