Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu and ag efflux protein cusf | SAMN05421512_11494 | Not Available | Positive | 4673962 - 4674243 | 10132.6 |
| hypothetical protein | SAMN05421512_11495 | Not Available | Negative | 4674290 - 4674889 | 22265.1 |
| selenocysteine lyase/cysteine desulfurase | SAMN05421512_11496 | Not Available | Positive | 4675249 - 4676457 | 43225.4 |
| iron-sulfur cluster assembly protein | SAMN05421512_11497 | Not Available | Negative | 4676534 - 4676911 | 13284.9 |
| fes assembly suf system protein | SAMN05421512_11498 | Not Available | Negative | 4676988 - 4677374 | 13973.3 |
| cysteine desulfurase / selenocysteine lyase | SAMN05421512_11499 | Not Available | Negative | 4677382 - 4678638 | 46063.9 |
| fe-s cluster assembly protein sufd | SAMN05421512_114100 | Not Available | Negative | 4678753 - 4680078 | 46671.1 |
| fe-s cluster assembly atp-binding protein | SAMN05421512_114101 | Not Available | Negative | 4680096 - 4680851 | 27369.1 |
| iron-regulated abc transporter membrane component sufb | SAMN05421512_114102 | Not Available | Negative | 4680905 - 4682377 | 54807.8 |
| cysteine desulfurase | SAMN05421512_114103 | Not Available | Negative | 4682509 - 4682987 | 16246.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
