Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN05421512_11484 | Not Available | Negative | 4662736 - 4663983 | 44401.2 |
| predicted arabinose efflux permease, mfs family | SAMN05421512_11485 | Not Available | Negative | 4664202 - 4665410 | 40956.6 |
| nh(3)-dependent nad(+) synthetase | SAMN05421512_11486 | Not Available | Negative | 4665487 - 4667250 | 63827.1 |
| response regulator receiver domain-containing protein | SAMN05421512_11487 | Not Available | Negative | 4667306 - 4667842 | 18958.1 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05421512_11488 | Not Available | Negative | 4668093 - 4669478 | 51656.2 |
| hypothetical protein | SAMN05421512_11489 | Not Available | Positive | 4669693 - 4670220 | 18084.3 |
| hypothetical protein | SAMN05421512_11490 | Not Available | Positive | 4670295 - 4670522 | 7633.16 |
| outer membrane protein tolc | SAMN05421512_11491 | Not Available | Positive | 4670519 - 4671991 | 52384.7 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN05421512_11492 | Not Available | Positive | 4672009 - 4673400 | 50902.8 |
| uncharacterized copper-binding protein, cupredoxin-like subfamily | SAMN05421512_11493 | Not Available | Positive | 4673436 - 4673930 | 17708.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
