Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05421512_11474 | Not Available | Negative | 4652679 - 4653215 | 19550.0 |
| cysteinyl-trna synthetase | SAMN05421512_11475 | Not Available | Negative | 4653843 - 4655288 | 52979.0 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05421512_11476 | Not Available | Positive | 4655619 - 4657361 | 63847.6 |
| hypothetical protein | SAMN05421512_11477 | Not Available | Positive | 4657521 - 4657763 | 8464.06 |
| transcriptional regulator, arsr family | SAMN05421512_11478 | Not Available | Positive | 4657933 - 4658280 | 12453.2 |
| crea protein | SAMN05421512_11479 | Not Available | Negative | 4658338 - 4658856 | 19019.0 |
| hypothetical protein | SAMN05421512_11480 | Not Available | Negative | 4658932 - 4659312 | 12849.1 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_11481 | Not Available | Positive | 4659521 - 4660009 | 18334.1 |
| protein of unknown function | SAMN05421512_11482 | Not Available | Positive | 4660131 - 4661390 | 43935.8 |
| glutamyl-trna synthetase | SAMN05421512_11483 | Not Available | Negative | 4661353 - 4662726 | 50536.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
