Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein rada | SAMN05421512_11464 | Not Available | Positive | 4641158 - 4642555 | 48073.5 |
| membrane protein required for colicin v production | SAMN05421512_11465 | Not Available | Positive | 4642691 - 4643332 | 22965.0 |
| amidophosphoribosyltransferase | SAMN05421512_11466 | Not Available | Positive | 4643478 - 4645007 | 55989.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_11467 | Not Available | Positive | 4645018 - 4645761 | 26377.6 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SAMN05421512_11468 | Not Available | Negative | 4645868 - 4646767 | 32825.0 |
| phosphatidylserine decarboxylase | SAMN05421512_11469 | Not Available | Negative | 4646779 - 4647480 | 25276.6 |
| atp-binding cassette, subfamily b | SAMN05421512_11470 | Not Available | Negative | 4647619 - 4649568 | 71515.5 |
| dna-binding transcriptional regulator, arsr family | SAMN05421512_11471 | Not Available | Negative | 4649565 - 4649972 | 14247.0 |
| chloramphenicol-sensitive protein rard | SAMN05421512_11472 | Not Available | Negative | 4650056 - 4650985 | 33057.1 |
| 2-isopropylmalate synthase | SAMN05421512_11473 | Not Available | Negative | 4651020 - 4652612 | 57463.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
