Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | SAMN05421512_11444 | Not Available | Positive | 4616238 - 4617467 | 45856.9 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05421512_11445 | Not Available | Negative | 4617576 - 4619102 | 55358.9 |
| polyphosphate kinase | SAMN05421512_11446 | Not Available | Negative | 4619095 - 4621314 | 82841.5 |
| dnaa protein | SAMN05421512_11447 | Not Available | Negative | 4621434 - 4622126 | 24678.4 |
| predicted purr-regulated permease perm | SAMN05421512_11448 | Not Available | Negative | 4622119 - 4623330 | 42887.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05421512_11449 | Not Available | Positive | 4623519 - 4624598 | 36369.8 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN05421512_11450 | Not Available | Positive | 4624664 - 4625269 | 21289.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421512_11451 | Not Available | Negative | 4625282 - 4626025 | 28196.3 |
| glutathione s-transferase | SAMN05421512_11452 | Not Available | Positive | 4626130 - 4626873 | 27255.1 |
| anaerobic selenocysteine-containing dehydrogenase | SAMN05421512_11453 | Not Available | Negative | 4626905 - 4629001 | 76221.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
