Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase subunit napb | SAMN05421512_11434 | Not Available | Positive | 4603243 - 4603728 | 17649.2 |
| cytochrome c-type protein napc | SAMN05421512_11435 | Not Available | Positive | 4603732 - 4604427 | 26217.0 |
| hypothetical protein | SAMN05421512_11436 | Not Available | Positive | 4604543 - 4605007 | 15996.0 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05421512_11437 | Not Available | Negative | 4605033 - 4605986 | 32809.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05421512_11438 | Not Available | Negative | 4606087 - 4607694 | 58756.1 |
| sugar or nucleoside kinase, ribokinase family | SAMN05421512_11439 | Not Available | Positive | 4607842 - 4608741 | 32776.9 |
| hypothetical protein | SAMN05421512_11440 | Not Available | Positive | 4608871 - 4610061 | 40758.2 |
| hypothetical protein | SAMN05421512_11441 | Not Available | Positive | 4610200 - 4612245 | 72072.4 |
| atp-binding cassette, subfamily b | SAMN05421512_11442 | Not Available | Negative | 4612362 - 4614149 | 64765.9 |
| aspartyl-trna synthetase | SAMN05421512_11443 | Not Available | Negative | 4614232 - 4616016 | 66853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
