Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase yafk | SAMN05421512_101274 | Not Available | Negative | 305438 - 306301 | 31559.6 |
| transcriptional regulator, merr family | SAMN05421512_101275 | Not Available | Positive | 306606 - 307019 | 15601.6 |
| cd2+/zn2+-exporting atpase | SAMN05421512_101276 | Not Available | Positive | 307129 - 309363 | 77369.3 |
| protein translocase subunit secf /protein translocase subunit secd | SAMN05421512_101277 | Not Available | Negative | 309415 - 311943 | 90087.7 |
| hypothetical protein | SAMN05421512_101278 | Not Available | Negative | 312461 - 312673 | 7047.12 |
| hypothetical protein | SAMN05421512_101279 | Not Available | Negative | 312761 - 313147 | 13304.1 |
| methylisocitrate lyase | SAMN05421512_101280 | Not Available | Negative | 313201 - 314115 | 32282.1 |
| acetyl-coa c-acetyltransferase | SAMN05421512_101281 | Not Available | Negative | 314220 - 315398 | 40589.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_101282 | Not Available | Negative | 315489 - 316202 | 24969.8 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421512_101283 | Not Available | Negative | 316202 - 316918 | 25713.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
