Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05421512_11424 | Not Available | Negative | 4594781 - 4595635 | 31015.7 |
| dissimilatory nitrite reductase (no-forming), copper type apoprotein | SAMN05421512_11425 | Not Available | Negative | 4595701 - 4596828 | 40569.5 |
| transcriptional regulator, crp/fnr family | SAMN05421512_11426 | Not Available | Positive | 4596976 - 4597680 | 25824.1 |
| hypothetical protein | SAMN05421512_11427 | Not Available | Negative | 4597652 - 4597984 | 12199.4 |
| hybrid cluster protein-associated redox disulfide domain-containing protein | SAMN05421512_11428 | Not Available | Negative | 4597989 - 4598228 | 8476.29 |
| uncharacterized protein involved in response to no | SAMN05421512_11429 | Not Available | Positive | 4598362 - 4599579 | 42444.8 |
| periplasmic nitrate reductase subunit nape | SAMN05421512_11430 | Not Available | Positive | 4599812 - 4600006 | 6868.37 |
| ferredoxin-type protein napf | SAMN05421512_11431 | Not Available | Positive | 4600016 - 4600522 | 17838.5 |
| periplasmic nitrate reductase chaperone napd | SAMN05421512_11432 | Not Available | Positive | 4600515 - 4600766 | 8588.49 |
| periplasmic nitrate reductase subunit napa apoprotein | SAMN05421512_11433 | Not Available | Positive | 4600769 - 4603270 | 93565.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
