Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05421512_11414 | Not Available | Positive | 4582731 - 4583561 | 29490.9 |
| nadh:ubiquinone oxidoreductase subunit | SAMN05421512_11415 | Not Available | Negative | 4584025 - 4584408 | 14821.1 |
| two-component system, chemotaxis family, response regulator chey | SAMN05421512_11416 | Not Available | Negative | 4584515 - 4585180 | 24741.3 |
| ribonucleoside-diphosphate reductase class ii | SAMN05421512_11417 | Not Available | Positive | 4586100 - 4589792 | 134964.0 |
| protein of unknown function | SAMN05421512_11418 | Not Available | Positive | 4589828 - 4590454 | 23947.6 |
| hypothetical protein | SAMN05421512_11419 | Not Available | Negative | 4590495 - 4590962 | 16064.2 |
| uncharacterized protein involved in response to no | SAMN05421512_11420 | Not Available | Negative | 4590959 - 4592155 | 41834.4 |
| pseudoazurin | SAMN05421512_11421 | Not Available | Negative | 4592246 - 4592683 | 15210.8 |
| cytochrome c oxidase accessory protein fixg | SAMN05421512_11422 | Not Available | Negative | 4592780 - 4594237 | 52079.5 |
| hypothetical protein | SAMN05421512_11423 | Not Available | Negative | 4594395 - 4594796 | 14502.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
