Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_1144 | Not Available | Negative | 4571648 - 4571746 | 3264.09 |
| topoisomerase-4 subunit b | SAMN05421512_1145 | Not Available | Positive | 4571928 - 4574006 | 75590.8 |
| hypothetical protein | SAMN05421512_1146 | Not Available | Positive | 4574189 - 4575019 | 30524.9 |
| hypothetical protein | SAMN05421512_1147 | Not Available | Positive | 4575090 - 4575485 | 13670.3 |
| superfamily ii dna and rna helicase | SAMN05421512_1148 | Not Available | Positive | 4575685 - 4577298 | 58766.7 |
| diguanylate cyclase | SAMN05421512_1149 | Not Available | Positive | 4577742 - 4578803 | 39632.7 |
| transcriptional regulator, asnc family | SAMN05421512_11410 | Not Available | Positive | 4578913 - 4579389 | 17182.0 |
| transcriptional regulator, rpir family | SAMN05421512_11411 | Not Available | Negative | 4579386 - 4580246 | 30532.7 |
| simple sugar transport system substrate-binding protein | SAMN05421512_11412 | Not Available | Positive | 4580531 - 4581481 | 32225.3 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05421512_11413 | Not Available | Positive | 4581601 - 4582728 | 39359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
