Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme, r subunit | SAMN05421512_113207 | Not Available | Positive | 4556027 - 4559092 | 116045.0 |
| hypothetical protein | SAMN05421512_113208 | Not Available | Positive | 4559082 - 4559810 | 28352.2 |
| transcriptional regulator, nlp family | SAMN05421512_113209 | Not Available | Positive | 4561067 - 4561354 | 10832.0 |
| hypothetical protein | SAMN05421512_113210 | Not Available | Positive | 4561351 - 4561536 | 6871.19 |
| hypothetical protein | SAMN05421512_113211 | Not Available | Negative | 4561454 - 4561735 | 10483.4 |
| hypothetical protein | SAMN05421512_113212 | Not Available | Positive | 4561914 - 4562147 | 8282.66 |
| chromosome partitioning protein, parb family | SAMN05421512_113213 | Not Available | Positive | 4562144 - 4562992 | 30725.7 |
| hypothetical protein | SAMN05421512_113214 | Not Available | Positive | 4562996 - 4563460 | 17200.3 |
| mu dna-binding domain-containing protein | SAMN05421512_113215 | Not Available | Positive | 4563457 - 4565628 | 79640.2 |
| aaa domain-containing protein | SAMN05421512_113216 | Not Available | Positive | 4565692 - 4566453 | 27989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
