Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_113187 | Not Available | Negative | 4536793 - 4537332 | 19082.8 |
| aaa domain-containing protein | SAMN05421512_113188 | Not Available | Negative | 4537673 - 4539994 | 84577.4 |
| pd-(d/e)xk nuclease superfamily protein | SAMN05421512_113189 | Not Available | Negative | 4539991 - 4540758 | 27801.9 |
| hypothetical protein | SAMN05421512_113190 | Not Available | Negative | 4540758 - 4540964 | 7532.08 |
| superfamily ii dna or rna helicase | SAMN05421512_113191 | Not Available | Negative | 4541172 - 4542860 | 60755.4 |
| hypothetical protein | SAMN05421512_113192 | Not Available | Negative | 4542874 - 4543497 | 22065.7 |
| aaa domain-containing protein | SAMN05421512_113193 | Not Available | Negative | 4543599 - 4544474 | 32202.5 |
| hypothetical protein | SAMN05421512_113194 | Not Available | Negative | 4544474 - 4544770 | 10742.7 |
| hypothetical protein | SAMN05421512_113195 | Not Available | Negative | 4544809 - 4545003 | 7258.46 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421512_113196 | Not Available | Negative | 4545088 - 4545810 | 26499.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
