Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_113150 | Not Available | Positive | 4499304 - 4500326 | 37334.4 |
| hypothetical protein | SAMN05421512_113151 | Not Available | Negative | 4500660 - 4501502 | 30906.4 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN05421512_113152 | Not Available | Positive | 4502959 - 4504488 | 54292.4 |
| hypothetical protein | SAMN05421512_113153 | Not Available | Positive | 4504610 - 4504738 | 4686.16 |
| uncharacterized conserved protein, duf302 family | SAMN05421512_113154 | Not Available | Positive | 4504755 - 4505141 | 13654.8 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN05421512_113155 | Not Available | Positive | 4505143 - 4505814 | 23144.8 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05421512_113156 | Not Available | Positive | 4505814 - 4507166 | 46927.1 |
| cu+-exporting atpase | SAMN05421512_113157 | Not Available | Positive | 4507215 - 4509548 | 81439.5 |
| uncharacterized conserved protein | SAMN05421512_113158 | Not Available | Positive | 4509580 - 4510059 | 16918.2 |
| hypothetical protein | SAMN05421512_113159 | Not Available | Negative | 4510265 - 4510519 | 9543.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
