Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | SAMN05421512_113120 | Not Available | Negative | 4468230 - 4470680 | 89367.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421512_113121 | Not Available | Negative | 4470964 - 4472256 | 46254.4 |
| rnase e | SAMN05421512_113122 | Not Available | Positive | 4473173 - 4475818 | 97127.1 |
| hypothetical protein | SAMN05421512_113123 | Not Available | Negative | 4476065 - 4476589 | 18128.1 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05421512_113124 | Not Available | Negative | 4477772 - 4478932 | 41624.8 |
| putative zn-dependent protease, contains tpr repeats | SAMN05421512_113125 | Not Available | Positive | 4479193 - 4480638 | 51614.7 |
| protein-disulfide isomerase | SAMN05421512_113126 | Not Available | Positive | 4480697 - 4481449 | 27140.7 |
| 3-dehydroquinate dehydratase | SAMN05421512_113127 | Not Available | Positive | 4481640 - 4482080 | 15862.8 |
| biotin carboxyl carrier protein | SAMN05421512_113128 | Not Available | Positive | 4482131 - 4482586 | 16015.2 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN05421512_113129 | Not Available | Positive | 4482601 - 4483950 | 49265.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
