Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, member 3 | SAMN05421512_11390 | Not Available | Positive | 4433704 - 4435602 | 70415.1 |
| putative hydrolase of the had superfamily | SAMN05421512_11391 | Not Available | Positive | 4435623 - 4436321 | 25777.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_11392 | Not Available | Negative | 4436349 - 4437731 | 49564.4 |
| methyltransferase domain-containing protein | SAMN05421512_11393 | Not Available | Negative | 4437930 - 4438637 | 25777.3 |
| dna polymerase iii, chi subunit | SAMN05421512_11394 | Not Available | Negative | 4438634 - 4439083 | 16942.8 |
| hypothetical protein | SAMN05421512_11395 | Not Available | Positive | 4439390 - 4439512 | 4005.04 |
| leucyl aminopeptidase | SAMN05421512_11396 | Not Available | Negative | 4439658 - 4441154 | 51877.7 |
| lipopolysaccharide export system permease protein | SAMN05421512_11397 | Not Available | Positive | 4441383 - 4442723 | 48226.3 |
| lipopolysaccharide export system permease protein | SAMN05421512_11398 | Not Available | Positive | 4442723 - 4443829 | 39568.6 |
| lps-assembly protein | SAMN05421512_11399 | Not Available | Positive | 4443829 - 4446264 | 90339.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
