Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent proteinase. serine peptidase. merops family s16 | SAMN05421512_11380 | Not Available | Negative | 4421412 - 4423835 | 89299.1 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05421512_11381 | Not Available | Negative | 4424298 - 4425563 | 46246.7 |
| atp-dependent clp protease, protease subunit | SAMN05421512_11382 | Not Available | Negative | 4425808 - 4426449 | 23186.1 |
| trigger factor | SAMN05421512_11383 | Not Available | Negative | 4426738 - 4428078 | 50186.2 |
| Trna-leu | Not Available | Not Available | Positive | 4428202 - 4428286 | Not Available |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05421512_11385 | Not Available | Negative | 4428413 - 4429942 | 50892.1 |
| catechol 2,3-dioxygenase | SAMN05421512_11386 | Not Available | Negative | 4429939 - 4430343 | 14003.8 |
| nitrogen regulatory protein p-ii family | SAMN05421512_11387 | Not Available | Positive | 4430768 - 4431106 | 12286.9 |
| l-glutamine synthetase | SAMN05421512_11388 | Not Available | Positive | 4431230 - 4432639 | 52149.8 |
| kynurenine formamidase | SAMN05421512_11389 | Not Available | Negative | 4432738 - 4433562 | 29251.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
