Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_11370 | Not Available | Negative | 4410596 - 4411549 | 34856.5 |
| predicted transcription regulator, contains hth domain, marr family | SAMN05421512_11371 | Not Available | Negative | 4411863 - 4412405 | 20544.8 |
| restriction endonuclease noti | SAMN05421512_11372 | Not Available | Positive | 4413036 - 4414061 | 37947.7 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05421512_11373 | Not Available | Positive | 4414132 - 4415253 | 41007.1 |
| site-specific dna recombinase | SAMN05421512_11374 | Not Available | Positive | 4415823 - 4416371 | 19925.2 |
| hypothetical protein | SAMN05421512_11375 | Not Available | Positive | 4416758 - 4417207 | 16638.5 |
| bro family, n-terminal domain | SAMN05421512_11376 | Not Available | Positive | 4418209 - 4418916 | 25799.2 |
| site-specific recombinase xerd | SAMN05421512_11377 | Not Available | Negative | 4418904 - 4420523 | 60392.6 |
| Trna-val | Not Available | Not Available | Positive | 4420616 - 4420691 | Not Available |
| dna-binding protein hu-beta | SAMN05421512_11379 | Not Available | Negative | 4420951 - 4421226 | 9300.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
