Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN05421512_11360 | Not Available | Negative | 4398900 - 4400171 | 44377.7 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_11361 | Not Available | Negative | 4400168 - 4400656 | 17598.5 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05421512_11362 | Not Available | Negative | 4400656 - 4401894 | 44554.0 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05421512_11363 | Not Available | Negative | 4401929 - 4402777 | 29851.7 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05421512_11364 | Not Available | Positive | 4402926 - 4403852 | 34030.4 |
| n-methylhydantoinase b | SAMN05421512_11365 | Not Available | Negative | 4403901 - 4405538 | 58367.2 |
| n-methylhydantoinase a | SAMN05421512_11366 | Not Available | Negative | 4405542 - 4407623 | 74217.2 |
| l-threonine aldolase | SAMN05421512_11367 | Not Available | Negative | 4407620 - 4408681 | 36701.8 |
| trap transporter, dctm subunit | SAMN05421512_11368 | Not Available | Negative | 4408703 - 4410007 | 45357.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_11369 | Not Available | Negative | 4410004 - 4410513 | 18265.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
