Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) transport system substrate-binding protein/two-component system, ompr family, sensor histidine kinase tcte | SAMN05421512_11350 | Not Available | Positive | 4388558 - 4389670 | 40135.9 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05421512_11351 | Not Available | Negative | 4389848 - 4390924 | 39006.4 |
| transcriptional regulator, gntr family | SAMN05421512_11352 | Not Available | Positive | 4391088 - 4391786 | 25926.1 |
| acetyl esterase | SAMN05421512_11353 | Not Available | Positive | 4391783 - 4392700 | 32982.2 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05421512_11354 | Not Available | Positive | 4392736 - 4393953 | 44064.9 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05421512_11355 | Not Available | Positive | 4394132 - 4395049 | 34025.3 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05421512_11356 | Not Available | Positive | 4395046 - 4395879 | 30437.5 |
| d-tagatose 3-epimerase | SAMN05421512_11357 | Not Available | Positive | 4395900 - 4396787 | 31933.3 |
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN05421512_11358 | Not Available | Positive | 4396784 - 4397776 | 35363.6 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05421512_11359 | Not Available | Negative | 4397885 - 4398859 | 35525.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
