Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arsr family | SAMN05421512_101254 | Not Available | Positive | 283854 - 284906 | 38323.8 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05421512_101255 | Not Available | Positive | 284908 - 285825 | 33939.3 |
| methionine synthase (b12-dependent) | SAMN05421512_101256 | Not Available | Positive | 285834 - 289565 | 136361.0 |
| hypothetical protein | SAMN05421512_101257 | Not Available | Negative | 289662 - 290741 | 39825.6 |
| pp_00255 | SAMN05421512_101258 | Not Available | Positive | 290985 - 291533 | Not Available |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421512_101259 | Not Available | Negative | 291511 - 292587 | 38147.6 |
| transcriptional regulator, lysr family | SAMN05421512_101260 | Not Available | Positive | 292719 - 293675 | 35237.7 |
| hypothetical protein | SAMN05421512_101261 | Not Available | Positive | 293691 - 294032 | 12460.8 |
| hypothetical protein | SAMN05421512_101262 | Not Available | Negative | 294042 - 294656 | 22730.5 |
| atp-binding cassette protein, chvd family | SAMN05421512_101263 | Not Available | Negative | 294831 - 296480 | 61644.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
