Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_11330 | Not Available | Negative | 4369371 - 4369895 | 18177.7 |
| hypothetical protein | SAMN05421512_11331 | Not Available | Negative | 4370118 - 4370663 | 19171.1 |
| cold-shock dna-binding protein family | SAMN05421512_11332 | Not Available | Negative | 4370894 - 4371478 | 21121.2 |
| lactoylglutathione lyase | SAMN05421512_11333 | Not Available | Positive | 4371850 - 4372290 | 16603.4 |
| Trna-glu | Not Available | Not Available | Positive | 4372432 - 4372507 | Not Available |
| chromate transporter | SAMN05421512_11335 | Not Available | Positive | 4372666 - 4373922 | 42534.2 |
| membrane protein yqaa, snare-associated domain | SAMN05421512_11336 | Not Available | Positive | 4373922 - 4374359 | 15699.7 |
| transcriptional regulator, iclr family | SAMN05421512_11337 | Not Available | Negative | 4374594 - 4375373 | 28726.0 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_11338 | Not Available | Positive | 4375687 - 4377252 | 56975.7 |
| peptide/nickel transport system permease protein | SAMN05421512_11339 | Not Available | Positive | 4377462 - 4378379 | 32867.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
