Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | SAMN05421512_11310 | Not Available | Positive | 4346737 - 4347420 | 24167.1 |
| hypothetical protein | SAMN05421512_11311 | Not Available | Negative | 4347460 - 4348590 | 41350.9 |
| Trna-val | Not Available | Not Available | Positive | 4348863 - 4348937 | Not Available |
| transcriptional regulator, arac family with amidase-like domain | SAMN05421512_11313 | Not Available | Positive | 4349230 - 4350267 | 38824.5 |
| diguanylate phosphodiesterase | SAMN05421512_11314 | Not Available | Positive | 4350464 - 4352530 | 75235.2 |
| general l-amino acid abc transporter atp-binding protein | SAMN05421512_11315 | Not Available | Negative | 4352746 - 4353546 | 30231.9 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05421512_11316 | Not Available | Negative | 4353588 - 4354889 | 46779.6 |
| general l-amino acid transport system permease protein | SAMN05421512_11317 | Not Available | Negative | 4354894 - 4356096 | 43310.9 |
| general l-amino acid-binding protein | SAMN05421512_11318 | Not Available | Negative | 4356290 - 4357306 | 36341.1 |
| cystathionine beta-lyase | SAMN05421512_11319 | Not Available | Positive | 4357606 - 4358784 | 41898.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
