Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is116/is110/is902 family protein | SAMN05421512_112259 | Not Available | Negative | 4336912 - 4337257 | 12051.1 |
| selenocysteine lyase/cysteine desulfurase | SAMN05421512_1131 | Not Available | Positive | 4337258 - 4338359 | 39328.9 |
| iron-sulfur cluster assembly protein | SAMN05421512_1132 | Not Available | Negative | 4338436 - 4338813 | 13284.9 |
| fes assembly suf system protein | SAMN05421512_1133 | Not Available | Negative | 4338890 - 4339276 | 13973.3 |
| cysteine desulfurase | SAMN05421512_1134 | Not Available | Negative | 4339284 - 4340540 | 46063.9 |
| iron-regulated abc transporter permease protein sufd | SAMN05421512_1135 | Not Available | Negative | 4340655 - 4341980 | 46671.1 |
| fe-s cluster assembly atp-binding protein | SAMN05421512_1136 | Not Available | Negative | 4341998 - 4342753 | 27369.1 |
| iron-regulated abc transporter membrane component sufb | SAMN05421512_1137 | Not Available | Negative | 4342807 - 4344279 | 54807.8 |
| cysteine desulfurase | SAMN05421512_1138 | Not Available | Negative | 4344411 - 4345598 | 40291.2 |
| hypothetical protein | SAMN05421512_1139 | Not Available | Positive | 4345954 - 4346610 | 24023.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
