Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | SAMN05421512_112249 | Not Available | Negative | 4325262 - 4327409 | 78131.2 |
| biotin carboxyl carrier protein /biotin carboxylase | SAMN05421512_112250 | Not Available | Negative | 4327419 - 4329449 | 73149.7 |
| propionyl-coa carboxylase carboxyltransferase subunit | SAMN05421512_112251 | Not Available | Negative | 4329484 - 4331016 | 55945.1 |
| biotin transport system substrate-specific component | SAMN05421512_112252 | Not Available | Negative | 4331073 - 4331636 | 19172.1 |
| transcriptional regulator, merr family | SAMN05421512_112253 | Not Available | Positive | 4331865 - 4333280 | 52649.8 |
| transcriptional regulator, merr family | SAMN05421512_112254 | Not Available | Positive | 4333417 - 4333848 | 16273.8 |
| uncharacterized domain 1-containing protein | SAMN05421512_112255 | Not Available | Positive | 4333904 - 4334377 | 16786.1 |
| acetyltransferase (gnat) family protein | SAMN05421512_112256 | Not Available | Positive | 4334370 - 4334837 | 17298.2 |
| isovaleryl-coa dehydrogenase | SAMN05421512_112257 | Not Available | Positive | 4334878 - 4336053 | 42880.2 |
| uncharacterized membrane protein ykva, duf1232 family | SAMN05421512_112258 | Not Available | Positive | 4336069 - 4336455 | 14214.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
