Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_112239 | Not Available | Negative | 4314037 - 4314717 | 24230.9 |
| protein of unknown function | SAMN05421512_112240 | Not Available | Negative | 4314714 - 4315031 | 11026.0 |
| two-component system, cell cycle response regulator divk | SAMN05421512_112241 | Not Available | Positive | 4315186 - 4315554 | 13830.8 |
| response regulator receiver modulated diguanylate cyclase | SAMN05421512_112242 | Not Available | Positive | 4315584 - 4317020 | 51914.5 |
| protein of unknown function | SAMN05421512_112243 | Not Available | Negative | 4317052 - 4317696 | 24641.0 |
| lsu ribosomal protein l33p | SAMN05421512_112244 | Not Available | Negative | 4318353 - 4318520 | 6408.98 |
| nudix domain-containing protein | SAMN05421512_112245 | Not Available | Negative | 4318691 - 4319434 | 27739.3 |
| uncharacterized conserved protein, duf983 family | SAMN05421512_112246 | Not Available | Negative | 4319431 - 4319916 | 17373.3 |
| rnase r | SAMN05421512_112247 | Not Available | Negative | 4319913 - 4322255 | 85590.8 |
| dna topoisomerase i | SAMN05421512_112248 | Not Available | Negative | 4322252 - 4324975 | 99006.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
